View ProXL Documentation
Signin
A bifunctional role for the UHRF1 UBL domain for controlling hemi-methylated DNA...


Project Information
Title:
A bifunctional role for the UHRF1 UBL domain for controlling hemi-methylated DNA-dependent histone ubiquitylation
X
Project Title cannot be empty
Abstract:
DNA methylation patterns, which regulate gene expression programs, are maintained through a highly coordinated process orchestrated by the RING E3 ubiquitin ligase UHRF1. UHRF1 controls DNA methylation inheritance by reading epigenetic modifications to histones and DNA that activate histone H3 ubiquitylation. Here, we find that all five domains of UHRF1, including the previously uncharacterized ubiquitin-like domain (UBL), cooperate for hemi- methylated DNA-dependent H3 ubiquitin ligation. Our structural and biochemical studies, including mutations found in cancer genomes, reveal a bifunctional requirement for the UBL in histone modification: (1) the UBL, and not the RING domain, is the primary E2-recognition domain for UHRF1 and (2) the UBL domain coordinates with other UHRF1 domains that recognize epigenetic marks on DNA and histone H3 to direct ubiquitin to H3. Finally, we show UBLs from other E3s also have a conserved interaction with the E2, Ube2D, highlighting the potential prevalence of interactions between UBLs and E2s.
X
Project Abstract cannot be empty
Notes:
This page provides public access to data associated with DaRosa et al. (2018).
Explore Data
[Stats/QC] [Peptides] [Proteins] [Image] [Structure]
AZ567: UHRF1 + HeDNA + peptide + E2-Ub BS3 10 mins: October 2017: KV 1.4.3 PV 2.08 (999)
Linker: bs3
Search Programs:
kojak 1.4.3
percolator 2.08
Upload: 2017-10-14 11:22:59
FASTA file: 2017-10-Ecoli-UHRF1.fasta
Raw MS data files:
X
Web Link URL is invalid
AZ561_1pepCnt_plusRev.fasta
QEP2_2017_1003_AZ_70_az567_xlink05.mzML
QEP2_2017_1003_AZ_70_az567_xlink05.raw
QEP2_2017_1003_AZ_71_az567_xlink09.mzML
QEP2_2017_1003_AZ_71_az567_xlink09.raw
{{linkLabel}}
Additional files:
Kojak.conf
Kojak.conf
[Stats/QC] [Peptides] [Proteins] [Image] [Structure]
AZ568: UHRF1 + HeDNA + peptide + E2-Ub BS3 45 mins: October 2017: KV 1.4.3 PV 2.08 (998)
Linker: bs3
Search Programs:
kojak 1.4.3
percolator 2.08
Upload: 2017-10-14 11:14:02
FASTA file: 2017-10-Ecoli-UHRF1.fasta
Raw MS data files:
X
Web Link URL is invalid
AZ561_1pepCnt_plusRev.fasta
QEP2_2017_1003_AZ_73_az568_xlink05.mzML
QEP2_2017_1003_AZ_73_az568_xlink05.raw
QEP2_2017_1003_AZ_74_az568_xlink09.mzML
QEP2_2017_1003_AZ_74_az568_xlink09.raw
{{linkLabel}}
Additional files:
Kojak.conf
Kojak.conf
© 2023 University of Washington
Managed by Michael Riffle (mriffle@uw.edu)