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The molecular architecture of the Dam1 kinetochore complex is defined by cross-l...

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SCFFBXL3 cross-linked with DSS. Raw Data for Supplemental Table 4 (186)

Linker:

dss

Search Programs:

kojak	1.0
percolator	Version Unknown

Upload date:

2015-06-10 23:04:00

FASTA file:

RJAZ10-comet-plus.fasta

Cutoffs Applied On Import:

Peptide Cutoff:	q-value	0.05
PSM Cutoff:	q-value	0.05

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PEP (percolator)		value has to be a decimal number
SVM Score (percolator)		value has to be a decimal number
Score (kojak)		value has to be a decimal number
dScore (kojak)		value has to be a decimal number
q-value (percolator)		value has to be <= 0.05 value has to be a decimal number

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Peptide Filters

PEP (percolator)		value has to be a decimal number
SVM Score (percolator)		value has to be a decimal number
p-value (percolator)		value has to be a decimal number
q-value (percolator)		value has to be <= 0.05 value has to be a decimal number

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Type Filter:

crosslinks looplinks unlinked

Modification Filter:

No modifications 14.02 15.99 28.03 42.01 42.05 155.09 156.08

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only non-unique PSMs intra-protein links

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Peptides ():

[Download Data] Choose file format: Tab-delimited peptide data Tab-delimited PSM data Peptides for Skyline PRM methods (Chavez et al) Peptides for Skyline Quantitation (Shulman et al)

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PSM Data

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Corr (kojak) dScore (kojak) Link Mass (kojak) Mod Mass (kojak) Norm Rank (kojak) Obs Mass (kojak) PEP (percolator) Peptide Mass (kojak) PPM Error (kojak) q-value (percolator) Ret Time (kojak) Score (kojak) SVM Score (percolator)

Peptide Data

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p-value (percolator) PEP (percolator) q-value (percolator) SVM Score (percolator)

Managed by Michael Riffle (mriffle@uw.edu)