View ProXL Documentation
Signin
The molecular architecture of the Dam1 kinetochore complex is defined by cross-l...
X
Default Saved

X

Peptides for Scan

X

Spectrum Viewer

Looplinked peptide:
||
++
Crosslinked peptides:
    
|
    
Dimer:
 

List search proteins:

[Stats/QC] [Peptide View] [Coverage Report] [Image View] [Structure]
X
Cutoff value is not valid

X

Choose the searches to display

X

Change the display order of the searches

Search:
Change searches
BARD1/BRAC1 cross-linked with DSS. Raw Data for Supplemental Table 3 (187)
Linker: dss
Search Programs:
kojak 1.0
percolator Version Unknown
Upload date: 2015-06-10 23:40:52
FASTA file: 2014-06-fly-ecoli-contam-plus.fasta
Cutoffs Applied On Import:
Peptide Cutoff: q-value 0.05
PSM Cutoff: q-value 0.05
PSM Filters:

X

PSM Filters

PEP (percolator)
value has to be a decimal number
SVM Score (percolator)
value has to be a decimal number
Score (kojak)
value has to be a decimal number
dScore (kojak)
value has to be a decimal number
q-value (percolator)
value has to be <= 0.05
value has to be a decimal number
X
Cutoff value is not valid
Peptide Filters:

X

Peptide Filters

PEP (percolator)
value has to be a decimal number
SVM Score (percolator)
value has to be a decimal number
p-value (percolator)
value has to be a decimal number
q-value (percolator)
value has to be <= 0.05
value has to be a decimal number
X
Cutoff value is not valid
Type Filter:

X

Minimum PSM Filter

Minimum PSMs:
Minimum PSMs:
Showing All
Exclude links with:
Exclude organisms:
Exclude protein(s):
 
URL Shortcut
Use this URL to share this page and all current options with authorized users. This URL does not provide access rights to anyone with the URL.
 

Proteins ():

[View Crosslinks] [View Looplinks] [Download Data ()]
Change Displayed Peptide and PSM data

X

Change Displayed Data

Changing these values and saving will cause a page reload
PSM Data
Click on items to display
Drag the items to the order to display them in.
Click the to remove.
Corr (kojak)
dScore (kojak)
Link Mass (kojak)
Mod Mass (kojak)
Norm Rank (kojak)
Obs Mass (kojak)
PEP (percolator)
Peptide Mass (kojak)
PPM Error (kojak)
q-value (percolator)
Ret Time (kojak)
Score (kojak)
SVM Score (percolator)
Peptide Data
Click on items to display
Drag the items to the order to display them in.
Click the to remove.
p-value (percolator)
PEP (percolator)
q-value (percolator)
SVM Score (percolator)
© 2025 University of Washington
Managed by Michael Riffle (mriffle@uw.edu)